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CASAVA CASAVA-1.7.0 PE DNA-Seq - analysis: duplicates
  Percentage of duplicates for all chromosomes
Chr | Reads | Good Reads | Good Reads Pr | Duplicates | Duplicates Pr | Excluded 0 score | Excluded 0 score Pr |
Contig3210.fa |
569284 |
561046 |
98.6 |
8238 |
1.4 |
0 |
0.0 |
Contig3199.fa |
316929 |
313497 |
98.9 |
3432 |
1.1 |
0 |
0.0 |
Contig3211.fa |
359855 |
356768 |
99.1 |
3087 |
0.9 |
0 |
0.0 |
Contig3208.fa |
342498 |
339751 |
99.2 |
2747 |
0.8 |
0 |
0.0 |
Contig3166.fa |
323904 |
321616 |
99.3 |
2288 |
0.7 |
0 |
0.0 |
Contig3203.fa |
285448 |
283485 |
99.3 |
1963 |
0.7 |
0 |
0.0 |
Contig3185.fa |
271851 |
269884 |
99.3 |
1967 |
0.7 |
0 |
0.0 |
Contig3202.fa |
276004 |
264254 |
95.7 |
11750 |
4.3 |
0 |
0.0 |
Contig3207.fa |
226061 |
224372 |
99.3 |
1689 |
0.7 |
0 |
0.0 |
Contig3120.fa |
264888 |
262590 |
99.1 |
2298 |
0.9 |
0 |
0.0 |
Contig3192.fa |
219254 |
217757 |
99.3 |
1497 |
0.7 |
0 |
0.0 |
Contig3204.fa |
187322 |
183187 |
97.8 |
4135 |
2.2 |
0 |
0.0 |
Contig3201.fa |
246547 |
243601 |
98.8 |
2946 |
1.2 |
0 |
0.0 |
Contig3197.fa |
197175 |
195057 |
98.9 |
2118 |
1.1 |
0 |
0.0 |
Contig3195.fa |
203640 |
202226 |
99.3 |
1414 |
0.7 |
0 |
0.0 |
Contig3194.fa |
146473 |
145003 |
99.0 |
1470 |
1.0 |
0 |
0.0 |
Contig122.fa |
197518 |
196321 |
99.4 |
1197 |
0.6 |
0 |
0.0 |
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Total |
4634651 |
4580415 |
98.8 |
54236 |
1.2 |
0 |
0.0 |
Added by CASAVA, last edited by CASAVA on 03-11-10
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